BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029C12SP1|AL429046
(885 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1666 1728 0.0
>3x_Contig1666
Length = 16162
Score = 1728 bits (870), Expect = 0.0
Identities = 879/885 (99%)
Strand = Plus / Plus
Query: 1 gtgccatatacatcggtgttccgatcatatctttcccgcctgtagatttgttattggcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10318 gtgccatatacatcggtgttccgatcatatctttcccgcctgtagatttgttattggcat 10377
Query: 61 ccagtgatatcctctttgatccgttctttgcaatgagttttgcggcaccaaaatctacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10378 ccagtgatatcctctttgatccgttctttgcaatgagttttgcggcaccaaaatctacat 10437
Query: 121 atttgataacgccattacgatccaataagatattctccggtttgatatctctgtgcacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10438 atttgataacgccattacgatccaataagatattctccggtttgatatctctgtgcacaa 10497
Query: 181 ctccagattggtgcaaacatgccaatccctcaagtaattgtagtgtgtaaacttgagtka 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 10498 ctccagattggtgcaaacatgccaatccctcaagtaattgtagtgtgtaaacttgagtta 10557
Query: 241 ccatttcatcttcaatccggccatgttcgagtaaactggctaaggaggaaccctcgcaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10558 ccatttcatcttcaatccggccatgttcgagtaaactggctaaggaggaaccctcgcaga 10617
Query: 301 attccataaagatattaaccttgtctctgtgaacttccacaccatagtactgaacaatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10618 attccataaagatattaaccttgtctctgtgaacttccacaccatagtactgaacaatat 10677
Query: 361 tcgggtgatttaagatctccatgacgcgcatttcttctttgagagatgggaaaayhtgct 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 10678 tcgggtgatttaagatctccatgacgcgcatttcttctttgagagatgggaaaatttgct 10737
Query: 421 tcatggatttagcatcttggattttgatctcttttaccgctaaaatatcaccagtatcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10738 tcatggatttagcatcttggattttgatctcttttaccgctaaaatatcaccagtatcta 10797
Query: 481 ggttaacagcggaatatacagtaccaaagctaccacttccgataaagctacgcttttgcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10798 ggttaacagcggaatatacagtaccaaagctaccacttccgataaagctacgcttttgcc 10857
Query: 541 atctaatagaaaggttagatattgaagaagcaagaganttcaacaatttgctttgattat 600
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 10858 atctaatagaaaggttagatattgaagaagcaagagatttcaacaatttgctttgattat 10917
Query: 601 cggnatcatcaanaactttaccaacagaataatgccttttgactttgacaaccttttcca 660
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10918 cggtatcatcaataactttaccaacagaataatgccttttgactttgacaaccttttcca 10977
Query: 661 tatctgttattgcattcatacgcatctctgaattaacagccaaaatcatatcatcgtcag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10978 tatctgttattgcattcatacgcatctctgaattaacagccaaaatcatatcatcgtcag 11037
Query: 721 catcatcgatatcaaagtttggtcttgtttgttgagcatcaatcctttcagcttctctgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11038 catcatcgatatcaaagtttggtcttgtttgttgagcatcaatcctttcagcttctctgg 11097
Query: 781 atcttgcccctgtgatgtcgaagtgagatattaacaatgacatacatctagcaatcttct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11098 atcttgcccctgtgatgtcgaagtgagatattaacaatgacatacatctagcaatcttct 11157
Query: 841 ctttcaacaacttgaattccttctcctcaatccccaaaatattcc 885
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11158 ctttcaacaacttgaattccttctcctcaatccccaaaatattcc 11202
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6925
Number of Sequences: 1807
Number of extensions: 6925
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 885
length of database: 10,358,551
effective HSP length: 16
effective length of query: 869
effective length of database: 10,329,639
effective search space: 8976456291
effective search space used: 8976456291
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)